To achieve an ongoing genomic surveillance in LMICs, we encourage GPS partners to generate and analyse data locally. For the latter, GPS2, together with our sister project JUNO, develop a series of online bioinformatics training modules and they are freely available at our training site.
Below are tutorial videos to illustrate how to use web-based tools to perform bioinformatic analysis and to visualise analysed data.
In silico serotype, GPSC, MLST and antibiotic resistance
Visualisation of phylogeny with temporal and spatial metadata
Visualisation of recombination and pangenome analysis