Training: Drag and Drop Tools

To achieve an ongoing genomic surveillance in LMICs, we encourage GPS partners to generate and analyse data locally. For the latter, GPS2, together with our sister project JUNO, develop a series of online bioinformatics training modules and they are freely available at our training site.

Below are tutorial videos to illustrate how to use web-based tools to perform bioinformatic analysis and to visualise analysed data.


In silico serotype, GPSC, MLST and antibiotic resistance

Example assemblies


Visualisation of phylogeny with temporal and spatial metadata

Microeact Introduction from Genomic Pathogen Surveillance on Vimeo.


Example data


Visualisation of recombination and pangenome analysis

Example recombination data Example pan genome data